Confidence

    • Welcome to Confidence

    About Confidence

    Confidence is a powerful application for cross-platform differential expression analysis, with gene scoring and pathway analysis tools. Our platform integrates multiple statistical methods to provide robust and comprehensive results for your RNA-seq data.

    Multiple Methods

    Analyze your data using DESeq2, Limma, NOISeq, and edgeR simultaneously

    Gene Scoring

    Confidence score system ranks genes based on agreement across methods

    Pathway Analysis

    Integrated pathway analysis with GO, KEGG, and Reactome

    Here is an example of the output from Confidence in a real world scenario.

    1) The PCA plots are shown to allow you to choose what variables are important in your model
    PCA Download Selected Plots
    2) After running Confidence, a Volcano plot shows the differentially expressed genes between the two groups
    Volcano Plot Download Volcano Plot
    Box Plot Download Boxplot
    Results
    Venn Diagram Download Venn
    Pathway Analysis Download Gost Plot
    Enrichment Download Selected Plots

    Confidence Analysis


    Welcome to Confidence, an application for cross-platform differential expression analysis, with gene scoring and pathway analysis tools.

    The steps to using Confidence are simple!

    Step 1: Upload your experimental metadata. This is a tabular summary of your samples and their relevant experimental conditions.
    Example Metadata

    Results will show up here after you import and run your data through CONFIDENCE!